Matthew Cserhati, Ph.D.

Matthew Cserhati, Ph.D., B.Sc.

Bioinformatics Programmer / Data Analyst
Dept. of Genetics, Cell Biology & Anatomy
Bioinformatics and Systems Biology Core
College of Medicine, University of Nebraska Medical Center


MSc, biology, Eotvos Lorand University, Budapest, 2003

BSc, software development, University of Szeged, 2010

PhD, bioinformatics, University of Szeged, 2011

Phone: (402) 559-5925
Fax: (402) 559-5942

Email: matyas.cserhati (at) unmc (dot) edu

Mailing Address:
2038, Swanson Hall
985145, Nebraska Medical Center
Omaha, NE 68198-5145

Recent publications:

Cserháti, M., Shu, J., Weeks, D. P., Ladunga, I. Ensemble Regulation of a Large System of Genes. Manuscript to be submitted.

Szécsényi, M., Cserháti, M., Zvara, Á., Dudits, D., Györgyey, J. Monitoring of transcriptional responses in roots of six wheat cultivars during mild drought stress. Cereal Research Communications. 2013 (41).

Brueggeman A J, Gangadharaiah D S, Cserhati M, Diaz-Cano D C, Weeks D P, Ladunga I. Activation of the Carbon Concentrating Mechanism by CO2 Deprivation Coincides With Massive Transcriptional Restructuring in Chlamydomonas reinhardtii. Plant Cell, 2012.

Áy Z, Mihály R, Cserháti M, Kótai É, Pauk J. The effect of high concentrations of glufosinate ammonium on the yield components of transgenic spring wheat (Triticum aestivum L.) constitutively expressing the bar gene. TheScientificWorldJOURNAL. 2012.

Cseri A, Cserháti M, von Korff M, Bettina N, Gábor V H, Palágyi A, Pauk J, Dudits D, Törjék O. Allele mining and haplotype discovery in barley candidate genes for drought tolerance. Euphytica. 2012. Volume 181, Number 3, 341-356, DOI: 10.1007/s10681-011-0445-7

Presentations, abstracts:

Regulation of Ribosomal Protein Genes in Human Based on ENCODE Experiments. Matyas F. Cserhati, Jiang Shu, Samuel A McInturf, Donald P. Weeks, Istvan Ladunga. Systems Biology: Networks, p. 45. Cold Spring Harbor, New York. March, 2013.

Massive Changes in Gene Expression Associated with Activation of the CO2-Concentrating Mechanism in Chlamydomonas reinhardtii. A. J. Brueggeman, D. S. Gangadharaiah, M. Cserhati, D. P. Weeks, I. Ladunga.Plant Science Retreat, Nebraska City, October, 2012.

Highly Coordinated Co-regulation of Ribosomal Genes during Growth and Stress. Matthew Cserhati, Jiang Shu, Donald P. Weeks, Istvan Ladunga. IANR Life Sciences Conference. Lincoln. September, 2012.


Supplemental material for submitted papers:

Perl script for genome analysis